EnhancerDB
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  3. rs546858725[chr1:27901435]
Enhancers that have rs546858725[chr1:27901435]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27901397 27901604 vista929
VISTA
Transcript factors that have rs546858725[chr1:27901435]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27901391 27902047 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107802595
chr1 27901422 27901437 HNF4A JASPAR yes 27711045
chr1 27901422 27901437 HNF4A JASPAR yes 118258654
chr1 27901431 27901436 SP1 TRANSFAC yes 27711046
chr1 27901431 27901436 SP1 TRANSFAC yes 118258655
Genes associated with rs546858725[chr1:27901435], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More