EnhancerDB
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  3. rs546885535[chr12:56438953]
Enhancers that have rs546885535[chr12:56438953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 56438391 56456078 enh2386
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs546885535[chr12:56438953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 56436824 56439032 ZNF274 GTRD no Bone Marrow (K562) 21550895
chr12 56436990 56439157 ZNF274 GTRD no Bone Marrow (K562) 21550896
chr12 56437312 56438980 ZNF274 GTRD no Bone Marrow (K562) 21550899
chr12 56437404 56439021 ZNF274 GTRD no Bone Marrow (K562) 21550900
chr12 56437696 56439072 ZNF274 GTRD no Bone Marrow (K562) 21550901
chr12 56438234 56438970 ZNF274 GTRD no Bone Marrow (K562) 21550903
chr12 56438250 56439030 ZNF274 GTRD no Bone Marrow (K562) 21550904
chr12 56438277 56438975 ZNF274 GTRD no Bone Marrow (K562) 21550905
chr12 56438414 56438992 ZNF274 GTRD no Bone Marrow (K562) 21550907
chr12 56438430 56439020 ZNF274 GTRD no Bone Marrow (K562) 21550908
chr12 56438436 56438956 ZNF274 GTRD no Bone Marrow (K562) 21550909
chr12 56438457 56438964 ZNF274 GTRD no Bone Marrow (K562) 21550910
chr12 56438485 56438970 ZNF274 GTRD no Cervix (HeLa-S3) 21550912
chr12 56438947 56438957 SP1 JASPAR yes 121087073
chr12 56438948 56438958 SP1 JASPAR yes 121087074
chr12 56438950 56438956 NFE2 TRANSFAC yes 121087075
Genes associated with rs546885535[chr12:56438953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More