EnhancerDB
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  3. rs546888998[chr6:25176533]
Enhancers that have rs546888998[chr6:25176533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546888998[chr6:25176533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25176531 25176535 LFA1 TRANSFAC yes 100831837
Genes associated with rs546888998[chr6:25176533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More