EnhancerDB
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  3. rs546892147[chr1:204249941]
Enhancers that have rs546892147[chr1:204249941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546892147[chr1:204249941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204249930 204249944 RORA JASPAR yes 34687460
chr1 204249934 204249944 ALX3 JASPAR yes 34687461
chr1 204249934 204249944 ESX1 JASPAR yes 34687462
chr1 204249934 204249944 GSX1 JASPAR yes 34687463
chr1 204249934 204249944 GSX2 JASPAR yes 34687464
chr1 204249934 204249944 LBX2 JASPAR yes 34687465
chr1 204249934 204249944 MIXL1 JASPAR yes 34687466
chr1 204249934 204249944 RAX JASPAR yes 34687467
chr1 204249935 204249943 BARX1 JASPAR yes 34687471
chr1 204249935 204249943 BSX JASPAR yes 34687472
chr1 204249935 204249943 DLX6 JASPAR yes 34687473
chr1 204249935 204249943 ISX JASPAR yes 34687474
chr1 204249935 204249943 LBX1 JASPAR yes 34687475
chr1 204249935 204249943 LHX9 JASPAR yes 34687476
chr1 204249935 204249943 MSX1 JASPAR yes 34687477
chr1 204249935 204249943 MSX2 JASPAR yes 34687478
chr1 204249935 204249943 NKX6-2 JASPAR yes 34687479
chr1 204249935 204249943 PRRX1 JASPAR yes 34687480
chr1 204249935 204249943 RAX2 JASPAR yes 34687481
chr1 204249935 204249943 SHOX JASPAR yes 34687482
chr1 204249935 204249943 UNCX JASPAR yes 34687483
chr1 204249935 204249945 HOXA13 JASPAR yes 34687484
chr1 204249935 204249945 HOXB13 JASPAR yes 34687485
chr1 204249935 204249945 HOXD13 JASPAR yes 34687486
Genes associated with rs546892147[chr1:204249941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More