EnhancerDB
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  3. rs546896356[chr1:218630673]
Enhancers that have rs546896356[chr1:218630673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546896356[chr1:218630673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218630664 218630675 PHOX2A JASPAR yes 35381014
chr1 218630664 218630675 PROP1 JASPAR yes 35381015
chr1 218630666 218630677 CDX2 JASPAR yes 35381016
chr1 218630667 218630678 HOXA10 JASPAR yes 35381017
chr1 218630668 218630677 CDX1 JASPAR yes 35381021
chr1 218630668 218630678 HOXA13 JASPAR yes 35381022
chr1 218630668 218630678 HOXB13 JASPAR yes 35381023
chr1 218630668 218630678 HOXD13 JASPAR yes 35381024
chr1 218630672 218630678 TBP TRANSFAC yes 35381025
Genes associated with rs546896356[chr1:218630673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More