EnhancerDB
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  3. rs546928085[chr1:1617962]
Enhancers that have rs546928085[chr1:1617962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs546928085[chr1:1617962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1617943 1617963 ESR1 JASPAR yes 26199141
chr1 1617951 1617962 FOSL2 JASPAR yes 26199152
chr1 1617951 1617962 JUNB JASPAR yes 26199153
chr1 1617951 1617965 JUN JASPAR yes 26199154
Genes associated with rs546928085[chr1:1617962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More