EnhancerDB
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  3. rs546937627[chr12:51002408]
Enhancers that have rs546937627[chr12:51002408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs546937627[chr12:51002408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51002405 51002420 FOXP1 JASPAR yes 120851826
chr12 51002406 51002421 FOXP1 JASPAR yes 120851827
chr12 51002407 51002422 FOXP1 JASPAR yes 120851828
chr12 51002407 51002428 IRF1 JASPAR yes 120851829
chr12 51002408 51002423 FOXP1 JASPAR yes 120851830
chr12 51002408 51002429 IRF1 JASPAR yes 120851831
Genes associated with rs546937627[chr12:51002408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More