EnhancerDB
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  3. rs546943336[chr6:12348275]
Enhancers that have rs546943336[chr6:12348275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs546943336[chr6:12348275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12348257 12348278 IRF1 JASPAR yes 99963988
chr6 12348257 12348278 ZNF263 JASPAR yes 99963989
chr6 12348259 12348280 IRF1 JASPAR yes 99963990
chr6 12348261 12348282 IRF1 JASPAR yes 99963991
chr6 12348265 12348286 IRF1 JASPAR yes 99963992
chr6 12348267 12348282 PRDM1 JASPAR yes 99963993
chr6 12348267 12348282 STAT2 JASPAR yes 99963994
chr6 12348267 12348288 ZNF263 JASPAR yes 99963995
chr6 12348268 12348282 SPIC JASPAR yes 99963996
chr6 12348268 12348282 STAT1 JASPAR yes 99963997
chr6 12348269 12348283 IRF7 JASPAR yes 99963998
chr6 12348269 12348283 IRF8 JASPAR yes 99963999
chr6 12348269 12348284 IRF9 JASPAR yes 99964000
chr6 12348269 12348290 IRF1 JASPAR yes 99964001
chr6 12348270 12348285 FOXP1 JASPAR yes 99964002
chr6 12348271 12348286 PRDM1 JASPAR yes 99964003
chr6 12348271 12348286 STAT2 JASPAR yes 99964004
chr6 12348271 12348292 IRF1 JASPAR yes 99964005
chr6 12348275 12348296 IRF1 JASPAR yes 99964006
chr6 12348275 12348296 ZNF263 JASPAR yes 99964007
Genes associated with rs546943336[chr6:12348275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More