EnhancerDB
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  3. rs546951989[chr12:92170280]
Enhancers that have rs546951989[chr12:92170280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92164305 92177155 enh14875
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs546951989[chr12:92170280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92170145 92173899 ZNF274 GTRD no Blood (GM12878) 108048869
chr12 92170145 92173899 ZNF274 GTRD no Blood (GM12878) 108048870
chr12 92170263 92170284 IRF1 JASPAR yes 122703242
chr12 92170265 92170280 PRDM1 JASPAR yes 122703243
chr12 92170269 92170290 IRF1 JASPAR yes 122703244
chr12 92170278 92170290 FOXI1 JASPAR yes 122703246
chr12 92170279 92170293 ONECUT3 JASPAR yes 122703247
chr12 92170280 92170291 FOXC1 JASPAR yes 122703248
Genes associated with rs546951989[chr12:92170280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More