EnhancerDB
  1. Home
  2. SNP
  3. rs546981865[chr3:57939622]
Enhancers that have rs546981865[chr3:57939622]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57932901 57950075 enh20645
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546981865[chr3:57939622]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57939608 57939629 IRF1 JASPAR yes 2656885
chr3 57939609 57939630 IRF1 JASPAR yes 2656886
chr3 57939615 57939630 FOXP1 JASPAR yes 2656888
chr3 57939615 57939635 RREB1 JASPAR yes 2656889
chr3 57939615 57939636 IRF1 JASPAR yes 2656890
chr3 57939620 57939640 RREB1 JASPAR yes 2656891
chr3 57939621 57939642 IRF1 JASPAR yes 2656892
chr3 57939622 57939628 TCF4 TRANSFAC yes 2656893
chr3 57939622 57939637 FOXP1 JASPAR yes 2656894
Genes associated with rs546981865[chr3:57939622], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More