EnhancerDB
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  3. rs547054551[chr17:55489316]
Enhancers that have rs547054551[chr17:55489316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547054551[chr17:55489316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55489300 55489317 ESR1 JASPAR yes 54952332
chr17 55489300 55489318 ESR2 JASPAR yes 54952333
chr17 55489304 55489318 TLX1 JASPAR yes 54952334
chr17 55489316 55489324 NR4A2 JASPAR yes 54952335
chr17 55489316 55489329 EOMES JASPAR yes 54952336
Genes associated with rs547054551[chr17:55489316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More