EnhancerDB
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  3. rs547078379[chr1:232755519]
Enhancers that have rs547078379[chr1:232755519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
chr1 232753930 232757436 vista147
VISTA
Transcript factors that have rs547078379[chr1:232755519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232755510 232755521 DUX4 JASPAR yes 36178105
chr1 232755510 232755521 PHOX2A JASPAR yes 36178106
chr1 232755510 232755521 PROP1 JASPAR yes 36178107
chr1 232755510 232755521 DUX4 JASPAR yes 71162686
chr1 232755510 232755521 PHOX2A JASPAR yes 71162687
chr1 232755510 232755521 PROP1 JASPAR yes 71162688
chr1 232755514 232755522 RHOXF1 JASPAR yes 36178108
chr1 232755514 232755522 RHOXF1 JASPAR yes 71162689
Genes associated with rs547078379[chr1:232755519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More