EnhancerDB
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  3. rs547288889[chr19:2561107]
Enhancers that have rs547288889[chr19:2561107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs547288889[chr19:2561107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2560204 2563156 ZNF274 GTRD no Blood (GM12878) 21837102
chr19 2560204 2563156 ZNF274 GTRD no Blood (GM12878) 108362414
chr19 2560779 2564390 ZNF274 GTRD no Blood (GM12878) 21837103
chr19 2560779 2564390 ZNF274 GTRD no Blood (GM12878) 108362415
chr19 2560816 2563008 ZNF274 GTRD no Blood (GM12878) 21837104
chr19 2560816 2563008 ZNF274 GTRD no Blood (GM12878) 108362416
chr19 2560843 2564216 ZNF274 GTRD no Blood (GM12878) 21837105
chr19 2560843 2564216 ZNF274 GTRD no Blood (GM12878) 108362417
chr19 2560844 2563018 ZNF274 GTRD no Blood (GM12878) 21837106
chr19 2560844 2563018 ZNF274 GTRD no Blood (GM12878) 108362418
chr19 2560856 2562987 ZNF274 GTRD no Blood (GM12878) 21837107
chr19 2560856 2562987 ZNF274 GTRD no Blood (GM12878) 108362419
chr19 2560892 2563156 ZNF274 GTRD no Blood (GM12878) 21837108
chr19 2560892 2563156 ZNF274 GTRD no Blood (GM12878) 108362420
chr19 2560952 2563044 ZNF274 GTRD no Blood (GM12878) 21837109
chr19 2560952 2563044 ZNF274 GTRD no Blood (GM12878) 108362421
chr19 2560968 2563046 ZNF274 GTRD no Blood (GM12878) 21837110
chr19 2560968 2563046 ZNF274 GTRD no Blood (GM12878) 108362422
chr19 2560969 2563004 ZNF274 GTRD no Blood (GM12878) 21837111
chr19 2560969 2563004 ZNF274 GTRD no Blood (GM12878) 108362423
chr19 2561104 2561114 TBX21 JASPAR yes 112075071
chr19 2561105 2561113 TBX5 JASPAR yes 112075072
Genes associated with rs547288889[chr19:2561107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More