EnhancerDB
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  3. rs547397073[chr19:2563987]
Enhancers that have rs547397073[chr19:2563987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs547397073[chr19:2563987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2560779 2564390 ZNF274 GTRD no Blood (GM12878) 21837103
chr19 2560779 2564390 ZNF274 GTRD no Blood (GM12878) 108362415
chr19 2560843 2564216 ZNF274 GTRD no Blood (GM12878) 21837105
chr19 2560843 2564216 ZNF274 GTRD no Blood (GM12878) 108362417
chr19 2563967 2563987 RREB1 JASPAR yes 112075506
chr19 2563968 2563988 RREB1 JASPAR yes 112075507
chr19 2563970 2563990 RREB1 JASPAR yes 112075508
chr19 2563971 2563991 RREB1 JASPAR yes 112075509
chr19 2563982 2563993 E2F6 JASPAR yes 112075512
chr19 2563983 2563988 SP1 TRANSFAC yes 112075513
Genes associated with rs547397073[chr19:2563987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More