EnhancerDB
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  3. rs547425530[chr12:125003353]
Enhancers that have rs547425530[chr12:125003353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs547425530[chr12:125003353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125003139 125003643 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21580922
chr12 125003139 125003643 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108068800
chr12 125003278 125003934 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21580923
chr12 125003278 125003934 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108068801
chr12 125003317 125003887 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21580924
chr12 125003317 125003887 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108068802
chr12 125003347 125003358 ELK4 JASPAR yes 124387852
chr12 125003347 125003358 FLI1 JASPAR yes 124387853
Genes associated with rs547425530[chr12:125003353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More