EnhancerDB
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  3. rs547489475[chr12:52609857]
Enhancers that have rs547489475[chr12:52609857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs547489475[chr12:52609857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52609284 52609934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546771
chr12 52609284 52609934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033692
chr12 52609336 52609932 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546777
chr12 52609336 52609932 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108033703
chr12 52609336 52609932 TCF7L2 UCSC Txn Factor no Conserved 108033704
chr12 52609346 52609916 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546779
chr12 52609346 52609916 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033712
chr12 52609373 52609857 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033716
chr12 52609419 52609915 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546790
chr12 52609419 52609915 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033729
chr12 52609425 52609936 GATA3 UCSC Txn Factor no Conserved 108033730
chr12 52609445 52609909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546794
chr12 52609445 52609909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033735
chr12 52609456 52610006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546798
chr12 52609456 52610006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033741
chr12 52609513 52609889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546804
chr12 52609513 52609889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033748
chr12 52609628 52610012 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546806
chr12 52609628 52610012 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033750
chr12 52609804 52610321 REST UCSC Txn Factor no Conserved 108033751
chr12 52609804 52610321 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033752
Genes associated with rs547489475[chr12:52609857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More