EnhancerDB
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  3. rs547492839[chr12:52616961]
Enhancers that have rs547492839[chr12:52616961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs547492839[chr12:52616961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52616896 52617362 P63 GTRD no Skin (Keratinocyte) 21546872
chr12 52616921 52618080 ZNF143 GTRD no Epithelial (MCF-7) 21546873
chr12 52616921 52618080 ZNF143 GTRD no Epithelial (MCF-7) 108033753
chr12 52616924 52618047 ZNF143 GTRD no Epithelial (MCF-7) 21546874
chr12 52616924 52618047 ZNF143 GTRD no Epithelial (MCF-7) 108033754
chr12 52616933 52618176 ZNF143 GTRD no Epithelial (MCF-7) 21546875
chr12 52616933 52618176 ZNF143 GTRD no Epithelial (MCF-7) 108033755
chr12 52616959 52616965 TBP TRANSFAC yes 120930290
chr12 52616960 52617949 ZNF143 GTRD no Epithelial (MCF-7) 21546876
Genes associated with rs547492839[chr12:52616961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More