EnhancerDB
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  3. rs547558405[chr19:2552527]
Enhancers that have rs547558405[chr19:2552527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547558405[chr19:2552527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2552520 2552529 SNAI2 JASPAR yes 112073758
chr19 2552520 2552530 ID4 JASPAR yes 112073759
chr19 2552520 2552530 TCF3 JASPAR yes 112073760
chr19 2552520 2552530 TCF4 JASPAR yes 112073761
chr19 2552525 2552534 HIC2 JASPAR yes 112073762
Genes associated with rs547558405[chr19:2552527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More