EnhancerDB
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  3. rs547612384[chr2:28181635]
Enhancers that have rs547612384[chr2:28181635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 28181257 28181638 vista30805
VISTA
Transcript factors that have rs547612384[chr2:28181635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28181624 28181638 TLX1 JASPAR yes 22023612
chr2 28181624 28181638 TLX1 JASPAR yes 72602828
chr2 28181634 28181642 NKX6-1 JASPAR yes 22023614
chr2 28181634 28181642 NKX6-1 JASPAR yes 72602830
chr2 28181634 28181644 HOXC10 JASPAR yes 22023615
chr2 28181634 28181644 HOXC10 JASPAR yes 72602831
Genes associated with rs547612384[chr2:28181635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More