EnhancerDB
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Enhancers that have rs547679216[chr1:229230873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs547679216[chr1:229230873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 21389898
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 107877687
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 21389899
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 107877688
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 21389900
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 107877689
chr1 229228830 229232022 ZBTB33 GTRD no Lung (A549) 107877691
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 21389903
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 107877695
chr1 229228877 229232149 ZBTB33 GTRD no Lung (A549) 107877698
chr1 229228881 229232191 ZBTB33 GTRD no Lung (A549) 107877700
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 21389909
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 107877703
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 21389915
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 107877710
chr1 229229601 229230944 ZNF274 GTRD no Blood (GM12878) 107877747
chr1 229230197 229230937 ZNF274 GTRD no Cervix (HeLa-S3) 21389945
chr1 229230243 229231728 ZNF143 GTRD no Epithelial (MCF-7) 21389946
chr1 229230266 229231022 ZNF143 GTRD no Epithelial (MCF-7) 21389947
chr1 229230266 229231143 ZNF274 GTRD no Cervix (HeLa-S3) 21389948
chr1 229230266 229231174 ZNF143 GTRD no Epithelial (MCF-7) 21389949
chr1 229230279 229231743 ZNF143 GTRD no Epithelial (MCF-7) 21389950
chr1 229230300 229231826 ZNF143 GTRD no Epithelial (MCF-7) 21389951
chr1 229230302 229230937 ZNF143 GTRD no Epithelial (MCF-7) 21389952
chr1 229230312 229231169 ZNF143 GTRD no Epithelial (MCF-7) 21389953
chr1 229230315 229231963 ZNF143 GTRD no Epithelial (MCF-7) 21389954
chr1 229230336 229231805 ZNF143 GTRD no Epithelial (MCF-7) 21389955
chr1 229230348 229231906 ZNF274 GTRD no Cervix (HeLa-S3) 21389956
chr1 229230355 229231922 ZNF143 GTRD no Epithelial (MCF-7) 21389957
chr1 229230412 229232073 ZNF274 GTRD no Cervix (HeLa-S3) 21389958
chr1 229230413 229231028 ZNF274 GTRD no Liver (HepG2) 21389959
chr1 229230444 229231080 ZNF274 GTRD no Liver (HepG2) 21389961
chr1 229230464 229230990 ZNF143 GTRD no Epithelial (MCF-7) 21389962
chr1 229230473 229231029 ZNF143 GTRD no Epithelial (MCF-7) 21389963
chr1 229230477 229231055 ZNF274 GTRD no Liver (HepG2) 21389964
chr1 229230482 229230978 ZNF274 GTRD no Liver (HepG2) 21389965
chr1 229230494 229231580 ZNF274 GTRD no Cervix (HeLa-S3) 21389966
chr1 229230501 229231125 ZNF143 GTRD no Epithelial (MCF-7) 21389967
chr1 229230507 229230977 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21389968
chr1 229230507 229231080 ZNF274 GTRD no Liver (HepG2) 21389969
chr1 229230523 229230921 ZNF274 GTRD no Liver (HepG2) 21389970
chr1 229230537 229231028 ZNF143 GTRD no Epithelial (MCF-7) 21389971
chr1 229230541 229230956 ZNF143 GTRD no Epithelial (MCF-7) 21389972
chr1 229230544 229231012 ZNF274 GTRD no Liver (HepG2) 21389973
chr1 229230551 229231087 ZNF143 GTRD no Epithelial (MCF-7) 21389974
chr1 229230565 229230995 ZNF143 GTRD no Epithelial (MCF-7) 21389975
chr1 229230571 229230949 ZNF274 GTRD no Liver (HepG2) 21389976
chr1 229230602 229230996 ZNF143 GTRD no Epithelial (MCF-7) 21389977
chr1 229230610 229230954 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389978
chr1 229230615 229230942 ZNF143 GTRD no Epithelial (MCF-7) 21389979
chr1 229230616 229231031 ZNF143 GTRD no Epithelial (MCF-7) 21389980
chr1 229230622 229230952 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389981
chr1 229230627 229230903 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389982
chr1 229230640 229231186 ZNF274 GTRD no Liver (HepG2) 21389983
chr1 229230658 229230998 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389984
chr1 229230661 229231019 ZNF143 GTRD no Epithelial (MCF-7) 21389985
chr1 229230693 229231033 ZNF143 GTRD no Epithelial (MCF-7) 21389986
chr1 229230696 229231172 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389987
chr1 229230707 229231237 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389988
chr1 229230717 229231233 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389989
chr1 229230730 229231090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389990
chr1 229230763 229231083 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389991
chr1 229230782 229231102 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389992
chr1 229230812 229231088 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389993
chr1 229230836 229231092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389994
chr1 229230867 229230883 SOX8 JASPAR yes 35959524
chr1 229230867 229230887 ESR1 JASPAR yes 35959525
chr1 229230871 229230889 ESR2 JASPAR yes 35959526
chr1 229230872 229230887 ESR2 JASPAR yes 35959527
Genes associated with rs547679216[chr1:229230873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More