EnhancerDB
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  3. rs547725409[chr16:85356349]
Enhancers that have rs547725409[chr16:85356349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547725409[chr16:85356349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85354344 85356359 ZNF274 GTRD no Bone Marrow (K562) 21723435
chr16 85354344 85356359 ZNF274 GTRD no Bone Marrow (K562) 108213737
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 21723518
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 108213811
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 21723519
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 108213812
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 21723520
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 108213813
chr16 85356095 85356567 ZNF274 GTRD no Bone Marrow (K562) 21723521
chr16 85356095 85356567 ZNF274 GTRD no Bone Marrow (K562) 108213814
chr16 85356145 85356520 TCF7L2 GTRD no Colon (HCT116) 21723522
chr16 85356334 85356734 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723523
Genes associated with rs547725409[chr16:85356349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More