EnhancerDB
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  3. rs547855436[chr1:225639656]
Enhancers that have rs547855436[chr1:225639656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547855436[chr1:225639656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225639579 225639809 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384748
chr1 225639584 225639874 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21384749
chr1 225639652 225639664 NHLH1 JASPAR yes 35741910
Genes associated with rs547855436[chr1:225639656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More