EnhancerDB
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  3. rs547897090[chr1:19266752]
Enhancers that have rs547897090[chr1:19266752]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547897090[chr1:19266752]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19266743 19266755 PKNOX1 JASPAR yes 27163932
chr1 19266743 19266755 PKNOX2 JASPAR yes 27163933
chr1 19266743 19266755 TGIF1 JASPAR yes 27163934
chr1 19266743 19266755 TGIF2 JASPAR yes 27163935
chr1 19266749 19266753 NFE TRANSFAC yes 27163936
chr1 19266750 19266765 FOXA1 JASPAR yes 27163937
chr1 19266750 19266771 MAFG JASPAR yes 27163938
Genes associated with rs547897090[chr1:19266752], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More