EnhancerDB
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  3. rs547972122[chr1:27854269]
Enhancers that have rs547972122[chr1:27854269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547972122[chr1:27854269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27854053 27854653 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802585
chr1 27854253 27854274 ZNF263 JASPAR yes 27705410
chr1 27854256 27854277 ZNF263 JASPAR yes 27705411
chr1 27854262 27854269 E2F1 TRANSFAC yes 27705413
chr1 27854264 27854274 SP1 JASPAR yes 27705414
chr1 27854265 27854272 SP1 TRANSFAC yes 27705415
chr1 27854266 27854271 SP1 TRANSFAC yes 27705416
chr1 27854266 27854272 SP1 TRANSFAC yes 27705417
chr1 27854266 27854273 SP1 TRANSFAC yes 27705418
Genes associated with rs547972122[chr1:27854269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More