EnhancerDB
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  3. rs548001058[chr3:57979047]
Enhancers that have rs548001058[chr3:57979047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548001058[chr3:57979047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57979034 57979048 SPIC JASPAR yes 2662095
chr3 57979037 57979052 LEF1 JASPAR yes 2662097
chr3 57979038 57979052 TCF7L2 JASPAR yes 2662098
chr3 57979044 57979055 NFIL3 JASPAR yes 2662099
Genes associated with rs548001058[chr3:57979047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More