EnhancerDB
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  3. rs548005142[chr17:56074247]
Enhancers that have rs548005142[chr17:56074247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548005142[chr17:56074247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56074241 56074247 GATA3 JASPAR yes 55005129
Genes associated with rs548005142[chr17:56074247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More