EnhancerDB
  1. Home
  2. SNP
  3. rs548007729[chr2:204560871]
Enhancers that have rs548007729[chr2:204560871]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204544305 204564235 enh19129
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Spleen Uterus Heart
Transcript factors that have rs548007729[chr2:204560871]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204560858 204560877 RFX2 JASPAR yes 80256301
chr2 204560862 204560878 RFX5 JASPAR yes 80256302
chr2 204560865 204560877 HNF1B JASPAR yes 80256303
Genes associated with rs548007729[chr2:204560871], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More