EnhancerDB
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  3. rs548013827[chr5:171399786]
Enhancers that have rs548013827[chr5:171399786]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171376799 171400275 enh8875
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs548013827[chr5:171399786]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171399779 171399789 SREBF2 JASPAR yes 67752899
chr5 171399779 171399790 USF1 JASPAR yes 67752900
chr5 171399779 171399790 USF2 JASPAR yes 67752901
chr5 171399782 171399795 NFKB1 JASPAR yes 67752902
Genes associated with rs548013827[chr5:171399786], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More