EnhancerDB
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  3. rs548046053[chr16:85548242]
Enhancers that have rs548046053[chr16:85548242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548046053[chr16:85548242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85547686 85548286 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21726739
chr16 85547967 85548563 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21726740
chr16 85548009 85548393 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21726741
chr16 85548025 85548401 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21726743
chr16 85548036 85548260 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726744
chr16 85548153 85548573 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726745
chr16 85548167 85548387 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726746
chr16 85548182 85548446 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21726747
chr16 85548183 85548779 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21726748
chr16 85548183 85548779 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108214840
chr16 85548203 85548863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21726749
chr16 85548203 85548863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108214841
Genes associated with rs548046053[chr16:85548242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More