EnhancerDB
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  3. rs548059562[chr16:25052515]
Enhancers that have rs548059562[chr16:25052515]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs548059562[chr16:25052515]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25051060 25052740 AR GTRD no Prostate (PC-3) 21699846
chr16 25051140 25052566 ZNF274 GTRD no Blood (GM12878) 21699848
chr16 25051143 25052604 ZNF274 GTRD no Blood (GM12878) 21699849
chr16 25051170 25052710 ZNF274 GTRD no Blood (GM12878) 21699851
chr16 25051178 25052748 ZNF274 GTRD no Blood (GM12878) 21699852
chr16 25051185 25052792 ZNF274 GTRD no Blood (GM12878) 21699853
chr16 25051264 25052519 ZNF274 GTRD no Blood (GM12878) 21699856
chr16 25051289 25052599 ZNF274 GTRD no Blood (GM12878) 21699859
chr16 25051324 25052635 ZNF274 GTRD no Blood (GM12878) 21699863
chr16 25051833 25052716 ZNF274 GTRD no Bone Marrow (K562) 21699882
chr16 25052083 25052554 ZNF274 GTRD no Blood (GM12878) 21699899
chr16 25052345 25052825 ZNF274 GTRD no Bone Marrow (K562) 21699900
chr16 25052450 25052826 ZNF274 GTRD no Bone Marrow (K562) 21699901
chr16 25052501 25052520 REST JASPAR yes 10098573
Genes associated with rs548059562[chr16:25052515], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More