EnhancerDB
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  3. rs548102048[chr17:73342358]
Enhancers that have rs548102048[chr17:73342358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73329469 73350521 enh4601
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Kidney
Transcript factors that have rs548102048[chr17:73342358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73340966 73343520 ZBTB33 GTRD no Lung (A549) 108294030
chr17 73341017 73344853 ZBTB33 GTRD no Lung (A549) 108294031
chr17 73341203 73343790 ZBTB33 GTRD no Lung (A549) 108294032
chr17 73341204 73344064 ZBTB33 GTRD no Lung (A549) 108294033
chr17 73341268 73343676 ZBTB33 GTRD no Lung (A549) 108294034
chr17 73341270 73343579 ZBTB33 GTRD no Lung (A549) 108294035
chr17 73341339 73343026 ZBTB33 GTRD no Lung (A549) 108294036
chr17 73341384 73342704 ZBTB33 GTRD no Lung (A549) 108294037
chr17 73341399 73343044 ZBTB33 GTRD no Lung (A549) 108294038
chr17 73341407 73343175 ZBTB33 GTRD no Lung (A549) 108294039
chr17 73341439 73343059 ZBTB33 GTRD no Lung (A549) 108294040
chr17 73341442 73343406 ZNF274 GTRD no Cervix (HeLa-S3) 108294041
chr17 73341458 73342659 ZBTB33 GTRD no Lung (A549) 108294043
chr17 73341487 73343096 ZBTB33 GTRD no Lung (A549) 108294045
chr17 73341494 73344670 ZBTB33 GTRD no Brain (SK-N-SH) 21787757
chr17 73341494 73344670 ZBTB33 GTRD no Brain (SK-N-SH) 108294046
chr17 73341495 73343017 ZBTB33 GTRD no Lung (A549) 108294047
chr17 73341509 73342688 ZBTB33 GTRD no Lung (A549) 108294049
chr17 73341594 73343143 ZBTB33 GTRD no Lung (A549) 108294051
chr17 73341613 73342936 TCF7L2 GTRD no Colon (HCT116) 21787759
chr17 73341613 73342936 TCF7L2 GTRD no Colon (HCT116) 108294052
chr17 73341636 73343801 ZBTB33 GTRD no Brain (SK-N-SH) 21787762
chr17 73341636 73343801 ZBTB33 GTRD no Brain (SK-N-SH) 108294055
chr17 73341661 73342425 POLR2A UCSC Txn Factor no Conserved 108294061
chr17 73341703 73343032 TEF1 GTRD no Bone (Osteoblast) 21787768
chr17 73341703 73343032 TEF1 GTRD no Bone (Osteoblast) 108294064
chr17 73341761 73342837 ZBTB33 GTRD no Lung (A549) 108294069
chr17 73341822 73343892 ZBTB33 GTRD no Brain (SK-N-SH) 21787773
chr17 73341822 73343892 ZBTB33 GTRD no Brain (SK-N-SH) 108294070
chr17 73341824 73342776 TCF7L2 GTRD no Colon (HCT116) 21787774
chr17 73341824 73342776 TCF7L2 GTRD no Colon (HCT116) 108294071
chr17 73341876 73343634 ZBTB33 GTRD no Brain (SK-N-SH) 21787777
chr17 73341876 73343634 ZBTB33 GTRD no Brain (SK-N-SH) 108294076
chr17 73341880 73345223 TCF7L2 GTRD no Colon (HCT116) 21787778
chr17 73341880 73345223 TCF7L2 GTRD no Colon (HCT116) 108294077
chr17 73341888 73345087 TCF7L2 GTRD no Colon (HCT116) 21787779
chr17 73341888 73345087 TCF7L2 GTRD no Colon (HCT116) 108294078
chr17 73341891 73344485 ZBTB33 GTRD no Brain (SK-N-SH) 21787780
chr17 73341891 73344485 ZBTB33 GTRD no Brain (SK-N-SH) 108294079
chr17 73341903 73343151 ZBTB33 GTRD no Lung (A549) 108294081
chr17 73341967 73342501 ZNF274 GTRD no Blood (GM12878) 21787787
chr17 73341967 73342501 ZNF274 GTRD no Blood (GM12878) 108294087
chr17 73341969 73342614 ZNF274 GTRD no Cervix (HeLa-S3) 108294088
chr17 73341980 73342511 SOX2 GTRD no Neural Stem Cells (H9) 21787788
chr17 73341980 73342511 SOX2 GTRD no Neural Stem Cells (H9) 108294089
chr17 73342001 73343723 TCF7L2 GTRD no Colon (HCT116) 21787789
chr17 73342001 73343723 TCF7L2 GTRD no Colon (HCT116) 108294090
chr17 73342007 73342543 SOX2 GTRD no Neural Stem Cells (H9) 21787791
chr17 73342007 73342543 SOX2 GTRD no Neural Stem Cells (H9) 108294092
chr17 73342016 73342496 SOX2 GTRD no Neural Stem Cells (H9) 21787792
chr17 73342016 73342496 SOX2 GTRD no Neural Stem Cells (H9) 108294093
chr17 73342017 73342532 ZNF274 GTRD no Liver (HepG2) 108294094
chr17 73342022 73342525 ZNF274 GTRD no Blood (GM12878) 21787793
chr17 73342022 73342525 ZNF274 GTRD no Blood (GM12878) 108294095
chr17 73342033 73343621 ZBTB33 GTRD no Brain (SK-N-SH) 21787794
chr17 73342033 73343621 ZBTB33 GTRD no Brain (SK-N-SH) 108294096
chr17 73342053 73343857 ZBTB33 GTRD no Brain (SK-N-SH) 21787795
chr17 73342053 73343857 ZBTB33 GTRD no Brain (SK-N-SH) 108294097
chr17 73342061 73342550 SOX2 GTRD no Neural Stem Cells (H9) 21787796
chr17 73342061 73342550 SOX2 GTRD no Neural Stem Cells (H9) 108294098
chr17 73342069 73342526 ZNF274 GTRD no Bone Marrow (K562) 21787797
chr17 73342069 73342526 ZNF274 GTRD no Bone Marrow (K562) 108294099
chr17 73342073 73342567 SOX2 GTRD no Neural Stem Cells (H9) 21787798
chr17 73342073 73342567 SOX2 GTRD no Neural Stem Cells (H9) 108294100
chr17 73342074 73342518 ZNF274 GTRD no Liver (HepG2) 108294101
chr17 73342081 73342984 ZNF274 GTRD no Blood (GM12878) 21787799
chr17 73342081 73342984 ZNF274 GTRD no Blood (GM12878) 108294102
chr17 73342094 73342636 ZBTB33 GTRD no Lung (A549) 108294103
chr17 73342109 73342555 ZNF274 GTRD no Liver (HepG2) 108294104
chr17 73342112 73342391 SOX2 GTRD no Neural Stem Cells (H9) 21787800
chr17 73342112 73342391 SOX2 GTRD no Neural Stem Cells (H9) 108294105
chr17 73342122 73342480 ZNF274 GTRD no Blood (GM12878) 21787801
chr17 73342122 73342480 ZNF274 GTRD no Blood (GM12878) 108294106
chr17 73342130 73342874 MYOD GTRD no Muscle (Myoblast) 108294107
chr17 73342131 73342529 SOX2 GTRD no Neural Stem Cells (H9) 21787802
chr17 73342131 73342529 SOX2 GTRD no Neural Stem Cells (H9) 108294108
chr17 73342136 73342878 ZBTB33 GTRD no Lung (A549) 108294109
chr17 73342144 73342513 SOX2 GTRD no Neural Stem Cells (H9) 21787803
chr17 73342144 73342513 SOX2 GTRD no Neural Stem Cells (H9) 108294110
chr17 73342157 73342499 ZNF274 GTRD no Blood (GM12878) 21787804
chr17 73342157 73342499 ZNF274 GTRD no Blood (GM12878) 108294111
chr17 73342158 73342527 ZNF274 GTRD no Blood (GM12878) 21787805
chr17 73342158 73342527 ZNF274 GTRD no Blood (GM12878) 108294112
chr17 73342164 73342558 ZNF274 GTRD no Blood (GM12878) 21787806
chr17 73342164 73342558 ZNF274 GTRD no Blood (GM12878) 108294113
chr17 73342174 73342444 ZNF274 GTRD no Liver (HepG2) 108294114
chr17 73342195 73342436 ZNF274 GTRD no Liver (HepG2) 108294115
chr17 73342198 73342552 ZNF274 GTRD no Liver (HepG2) 108294116
chr17 73342205 73343053 ZNF274 GTRD no Bone Marrow (K562) 21787807
chr17 73342205 73343053 ZNF274 GTRD no Bone Marrow (K562) 108294117
chr17 73342205 73343134 ZBTB33 GTRD no Lung (A549) 108294118
chr17 73342356 73342369 NR2F1 JASPAR yes 55946026
chr17 73342357 73342365 CREB1 JASPAR yes 55946027
chr17 73342358 73342376 RARA JASPAR yes 55946028
Genes associated with rs548102048[chr17:73342358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More