EnhancerDB
  1. Home
  2. SNP
  3. rs548171642[chr17:65440623]
Enhancers that have rs548171642[chr17:65440623]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548171642[chr17:65440623]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65440617 65440638 IRF1 JASPAR yes 55505176
chr17 65440621 65440633 IRF1 JASPAR yes 55505177
Genes associated with rs548171642[chr17:65440623], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More