EnhancerDB
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  3. rs548179599[chr16:85576191]
Enhancers that have rs548179599[chr16:85576191]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548179599[chr16:85576191]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85565306 85577098 ZNF274 GTRD no Bone Marrow (K562) 21728069
chr16 85565306 85577098 ZNF274 GTRD no Bone Marrow (K562) 108215440
chr16 85565306 85577098 ZNF274 GTRD no Bone Marrow (K562) 108215441
chr16 85565306 85577098 ZNF274 GTRD no Bone Marrow (K562) 108215442
chr16 85573399 85576300 ZNF274 GTRD no Bone Marrow (K562) 21728510
chr16 85575650 85576203 ZNF274 GTRD no Bone Marrow (K562) 21728562
chr16 85575976 85576259 ZNF143 GTRD no Epithelial (MCF-7) 21728564
chr16 85576075 85576399 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21728565
chr16 85576118 85576348 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728566
chr16 85576128 85576372 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21728567
chr16 85576150 85578432 ZNF274 GTRD no Bone Marrow (K562) 21728568
chr16 85576167 85576557 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21728569
chr16 85576172 85576192 RREB1 JASPAR yes 12074261
chr16 85576174 85576194 RREB1 JASPAR yes 12074262
chr16 85576179 85576191 FOXI1 JASPAR yes 12074264
chr16 85576186 85576196 ELK1 JASPAR yes 12074265
chr16 85576187 85576198 ETV2 JASPAR yes 12074266
chr16 85576188 85576198 ERF JASPAR yes 12074267
chr16 85576188 85576198 ERG JASPAR yes 12074268
chr16 85576188 85576198 ETS1 JASPAR yes 12074269
chr16 85576188 85576198 FEV JASPAR yes 12074270
chr16 85576188 85576198 FLI1 JASPAR yes 12074271
chr16 85576188 85576206 NR3C1 JASPAR yes 12074272
chr16 85576190 85576196 ETS1 JASPAR yes 12074273
Genes associated with rs548179599[chr16:85576191], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More