EnhancerDB
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  3. rs548182766[chr17:39811849]
Enhancers that have rs548182766[chr17:39811849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr17 39811785 39812247 vista24793
VISTA
Transcript factors that have rs548182766[chr17:39811849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39811353 39812759 ZNF274 GTRD no Blood (GM12878) 108259221
chr17 39811792 39812302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758063
chr17 39811792 39812302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259222
chr17 39811801 39812161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758064
chr17 39811801 39812161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259223
chr17 39811839 39811853 CREB3 JASPAR yes 21238899
chr17 39811839 39811853 CREB3L1 JASPAR yes 21238900
chr17 39811839 39811853 CREB3 JASPAR yes 54269107
chr17 39811839 39811853 CREB3L1 JASPAR yes 54269108
chr17 39811842 39811854 HINFP JASPAR yes 21238901
chr17 39811842 39811854 HINFP JASPAR yes 54269109
chr17 39811843 39812239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758065
chr17 39811843 39812239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259224
chr17 39811848 39811854 SP1 TRANSFAC yes 21238902
chr17 39811848 39811854 SP1 TRANSFAC yes 54269110
chr17 39811848 39811858 SP1 JASPAR yes 21238903
chr17 39811848 39811858 SP1 JASPAR yes 54269111
Genes associated with rs548182766[chr17:39811849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More