EnhancerDB
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  3. rs548198877[chr6:16771817]
Enhancers that have rs548198877[chr6:16771817]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16764485 16776915 enh38835
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Muscle (A673) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
Transcript factors that have rs548198877[chr6:16771817]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16771811 16771821 NFIA JASPAR yes 100338202
chr6 16771813 16771819 NFIC JASPAR yes 100338203
Genes associated with rs548198877[chr6:16771817], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More