EnhancerDB
  1. Home
  2. SNP
  3. rs548203716[chr1:38498724]
Enhancers that have rs548203716[chr1:38498724]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38489029 38498761 enh26635
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Peripheral Blood (MM.1S) Breast Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs548203716[chr1:38498724]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38498708 38498726 ESR2 JASPAR yes 28191985
chr1 38498717 38498729 IRF1 JASPAR yes 28191986
chr1 38498722 38498726 YY1 TRANSFAC yes 28191987
chr1 38498722 38498737 FOXP1 JASPAR yes 28191988
chr1 38498723 38498738 FOXP1 JASPAR yes 28191989
chr1 38498724 38498739 FOXP1 JASPAR yes 28191990
Genes associated with rs548203716[chr1:38498724], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More