EnhancerDB
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  3. rs548217479[chr2:38936301]
Enhancers that have rs548217479[chr2:38936301]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs548217479[chr2:38936301]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38936297 38936309 HES5 JASPAR yes 73168189
chr2 38936298 38936308 HEY1 JASPAR yes 73168190
chr2 38936298 38936308 HEY2 JASPAR yes 73168191
Genes associated with rs548217479[chr2:38936301], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More