EnhancerDB
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  3. rs548235838[chr17:70616310]
Enhancers that have rs548235838[chr17:70616310]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70592834 70624575 enh32352
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs548235838[chr17:70616310]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70616212 70616396 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785789
chr17 70616239 70616405 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785790
chr17 70616303 70616315 NHLH1 JASPAR yes 55809975
chr17 70616304 70616314 FIGLA JASPAR yes 55809976
chr17 70616304 70616314 MSC JASPAR yes 55809977
chr17 70616304 70616314 MYF6 JASPAR yes 55809978
chr17 70616304 70616314 TFAP4 JASPAR yes 55809979
chr17 70616306 70616321 FOXA1 JASPAR yes 55809980
chr17 70616309 70616320 FOXB1 JASPAR yes 55809981
Genes associated with rs548235838[chr17:70616310], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More