EnhancerDB
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  3. rs548236327[chr1:28741784]
Enhancers that have rs548236327[chr1:28741784]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs548236327[chr1:28741784]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28741769 28741784 FOXP1 JASPAR yes 27768118
chr1 28741770 28741785 FOXP1 JASPAR yes 27768119
chr1 28741770 28741791 IRF1 JASPAR yes 27768120
chr1 28741771 28741786 FOXP1 JASPAR yes 27768121
chr1 28741772 28741793 IRF1 JASPAR yes 27768122
chr1 28741773 28741788 FOXP1 JASPAR yes 27768123
chr1 28741774 28741789 STAT2 JASPAR yes 27768124
chr1 28741774 28741795 IRF1 JASPAR yes 27768125
chr1 28741775 28741790 FOXP1 JASPAR yes 27768126
chr1 28741776 28741797 IRF1 JASPAR yes 27768127
chr1 28741780 28741795 PRDM1 JASPAR yes 27768128
chr1 28741780 28741801 IRF1 JASPAR yes 27768129
chr1 28741781 28741802 ZNF263 JASPAR yes 27768130
Genes associated with rs548236327[chr1:28741784], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More