EnhancerDB
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  3. rs548251080[chr16:89415292]
Enhancers that have rs548251080[chr16:89415292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548251080[chr16:89415292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89415278 89415293 FOXP1 JASPAR yes 12334558
chr16 89415279 89415294 FOXP1 JASPAR yes 12334559
chr16 89415280 89415295 FOXP1 JASPAR yes 12334561
chr16 89415281 89415296 FOXP1 JASPAR yes 12334562
chr16 89415281 89415302 IRF1 JASPAR yes 12334563
chr16 89415282 89415297 FOXP1 JASPAR yes 12334564
chr16 89415282 89415303 IRF1 JASPAR yes 12334565
chr16 89415283 89415298 FOXP1 JASPAR yes 12334566
chr16 89415285 89415300 FOXP1 JASPAR yes 12334567
chr16 89415287 89415302 FOXP1 JASPAR yes 12334568
Genes associated with rs548251080[chr16:89415292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More