EnhancerDB
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  3. rs548263542[chr17:57078332]
Enhancers that have rs548263542[chr17:57078332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57067145 57084553 enh4500
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs548263542[chr17:57078332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57078323 57078332 SNAI2 JASPAR yes 55038699
chr17 57078323 57078333 ID4 JASPAR yes 55038700
chr17 57078327 57078344 RXRA JASPAR yes 55038701
chr17 57078328 57078334 ZNF354C JASPAR yes 55038702
Genes associated with rs548263542[chr17:57078332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More