EnhancerDB
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  3. rs548280934[chr16:85339123]
Enhancers that have rs548280934[chr16:85339123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548280934[chr16:85339123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85338695 85339549 TCF7L2 GTRD no Colon (HCT116) 21723005
chr16 85338704 85339547 ZNF274 GTRD no Bone Marrow (K562) 21723006
chr16 85338705 85339481 TCF7L2 GTRD no Colon (HCT116) 21723007
chr16 85338714 85339500 ZNF143 GTRD no Epithelial (MCF-7) 21723008
chr16 85338776 85339625 TCF7L2 GTRD no Colon (HCT116) 21723009
chr16 85339112 85339131 PAX5 JASPAR yes 12044782
chr16 85339116 85339127 NFE2L2 JASPAR yes 12044783
chr16 85339120 85339124 NFE TRANSFAC yes 12044784
Genes associated with rs548280934[chr16:85339123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More