EnhancerDB
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  3. rs548316624[chr12:96800180]
Enhancers that have rs548316624[chr12:96800180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548316624[chr12:96800180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96800163 96800184 IRF1 JASPAR yes 123066471
chr12 96800164 96800185 IRF1 JASPAR yes 123066472
chr12 96800165 96800186 IRF1 JASPAR yes 123066473
chr12 96800168 96800183 FOXP1 JASPAR yes 123066474
chr12 96800170 96800185 FOXP1 JASPAR yes 123066475
chr12 96800171 96800186 FOXP1 JASPAR yes 123066476
chr12 96800175 96800189 SPIC JASPAR yes 123066477
chr12 96800178 96800183 ETS2 TRANSFAC yes 123066478
Genes associated with rs548316624[chr12:96800180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More