EnhancerDB
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  3. rs548375341[chr2:220866436]
Enhancers that have rs548375341[chr2:220866436]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 220850605 220868755 enh6163
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Astrocyte Muscle (A673) Colon (HCT116) Thyroid Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus
Transcript factors that have rs548375341[chr2:220866436]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 220866415 220866436 IRF1 JASPAR yes 81068612
chr2 220866415 220866436 ZNF263 JASPAR yes 81068613
chr2 220866416 220866437 ZNF263 JASPAR yes 81068615
chr2 220866420 220866441 IRF1 JASPAR yes 81068616
chr2 220866421 220866436 LEF1 JASPAR yes 81068617
chr2 220866421 220866442 IRF1 JASPAR yes 81068618
chr2 220866422 220866436 TCF7L2 JASPAR yes 81068619
chr2 220866424 220866445 IRF1 JASPAR yes 81068620
chr2 220866427 220866441 SPI1 JASPAR yes 81068621
chr2 220866427 220866448 IRF1 JASPAR yes 81068622
chr2 220866430 220866445 FOXP1 JASPAR yes 81068623
chr2 220866432 220866447 FOXP1 JASPAR yes 81068624
Genes associated with rs548375341[chr2:220866436], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More