EnhancerDB
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  3. rs548403138[chr1:224390218]
Enhancers that have rs548403138[chr1:224390218]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs548403138[chr1:224390218]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224390039 224390308 TCF7L2 GTRD no Colon (HCT116) 21384201
chr1 224390131 224391897 TEF1 GTRD no Bone (Osteoblast) 21384202
chr1 224390217 224390234 ESR1 JASPAR yes 35693274
Genes associated with rs548403138[chr1:224390218], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More