EnhancerDB
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  3. rs548409762[chr17:57457633]
Enhancers that have rs548409762[chr17:57457633]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs548409762[chr17:57457633]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57457624 57457645 IRF1 JASPAR yes 55055022
chr17 57457627 57457641 SPI1 JASPAR yes 55055024
chr17 57457627 57457648 IRF1 JASPAR yes 55055025
chr17 57457628 57457649 IRF1 JASPAR yes 55055026
chr17 57457629 57457650 IRF1 JASPAR yes 55055027
chr17 57457630 57457645 FOXP1 JASPAR yes 55055028
chr17 57457630 57457651 IRF1 JASPAR yes 55055029
chr17 57457631 57457652 IRF1 JASPAR yes 55055030
chr17 57457632 57457647 FOXP1 JASPAR yes 55055031
chr17 57457632 57457653 IRF1 JASPAR yes 55055032
chr17 57457633 57457648 FOXP1 JASPAR yes 55055033
chr17 57457633 57457654 IRF1 JASPAR yes 55055034
Genes associated with rs548409762[chr17:57457633], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More