EnhancerDB
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Enhancers that have rs548425527[chr17:39059451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs548425527[chr17:39059451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39059358 39059754 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757122
chr17 39059377 39059913 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757123
chr17 39059397 39059727 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757124
chr17 39059407 39059727 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757125
chr17 39059425 39059715 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757126
chr17 39059427 39059691 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757127
chr17 39059431 39059767 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21757128
chr17 39059436 39059692 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757129
chr17 39059445 39059460 PRDM1 JASPAR yes 54242137
Genes associated with rs548425527[chr17:39059451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More