EnhancerDB
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  3. rs548474453[chr16:85454886]
Enhancers that have rs548474453[chr16:85454886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs548474453[chr16:85454886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85451678 85455380 ZNF143 GTRD no Epithelial (MCF-7) 21725360
chr16 85451685 85455978 ZNF143 GTRD no Epithelial (MCF-7) 21725362
chr16 85451689 85455248 TCF7L2 GTRD no Colon (HCT116) 21725363
chr16 85451722 85454988 ZNF143 GTRD no Epithelial (MCF-7) 21725365
chr16 85451931 85455271 ZNF143 GTRD no Epithelial (MCF-7) 21725367
chr16 85452374 85454966 ZNF143 GTRD no Epithelial (MCF-7) 21725374
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 21725378
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214476
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214477
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 21725385
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214478
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214479
chr16 85453063 85456595 ZNF143 GTRD no Epithelial (MCF-7) 21725395
chr16 85453063 85456595 ZNF143 GTRD no Epithelial (MCF-7) 108214480
chr16 85454142 85455217 TCF7L2 GTRD no Colon (HCT116) 21725407
chr16 85454314 85455388 ZNF274 GTRD no Bone Marrow (K562) 21725417
chr16 85454585 85455351 ZNF274 GTRD no Bone Marrow (K562) 21725458
chr16 85454851 85455012 TCF7L2 GTRD no Colon (HCT116) 21725459
chr16 85454868 85454886 ESR1 JASPAR yes 12059076
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 21725460
chr16 85454868 85457486 TCF7L2 GTRD no Colon (HCT116) 108214481
Genes associated with rs548474453[chr16:85454886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More