EnhancerDB
  1. Home
  2. SNP
  3. rs548503859[chr1:27923968]
Enhancers that have rs548503859[chr1:27923968]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs548503859[chr1:27923968]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27923955 27923968 NFKB1 JASPAR yes 27714324
chr1 27923955 27923968 NFKB2 JASPAR yes 27714325
chr1 27923956 27923969 NFKB1 JASPAR yes 27714329
Genes associated with rs548503859[chr1:27923968], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More