EnhancerDB
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  3. rs548534275[chr15:67018225]
Enhancers that have rs548534275[chr15:67018225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67009025 67073235 enh16253
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548534275[chr15:67018225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67018218 67018233 TFAP2A JASPAR yes 24166695
chr15 67018218 67018233 TFAP2C JASPAR yes 24166696
chr15 67018220 67018233 TFAP2A JASPAR yes 24166697
chr15 67018220 67018233 TFAP2B JASPAR yes 24166698
chr15 67018220 67018233 TFAP2C JASPAR yes 24166699
chr15 67018221 67018235 PLAG1 JASPAR yes 24166700
Genes associated with rs548534275[chr15:67018225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More